PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18620
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 315aa    MW: 35046.9 Da    PI: 5.2623
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18620genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY56.65.2e-18183228346
               -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTT CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpk 46 
               Dg++WrKYGqK+++g +++rsYYrCt++  +C+++k v+++++d+ 
  EMT18620 183 DGHQWRKYGQKNINGRQHARSYYRCTYTerNCSATKTVQQQDQDGG 228
               9**************************999***********99975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-20171255IPR003657WRKY domain
SuperFamilySSF1182901.24E-17175255IPR003657WRKY domain
SMARTSM007743.0E-23181256IPR003657WRKY domain
PROSITE profilePS5081116.627183243IPR003657WRKY domain
PfamPF031061.0E-22183255IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MENPDAIDEI SVATEASATP RDSASYAEVA LSRACKQPDT LTSLENATAK HMDHSKNRDH  60
GLAEIEALLR REQELVTQLR ALILPQLHNV DSGSAELAVQ LFDDAIRCTT SVVSKLFTAG  120
SGATIELIDD KSLVRKNSTG TTATAIDDKM DEQAKPSCIV GRKRRRNDGK RSRSLVTNVP  180
HYDGHQWRKY GQKNINGRQH ARSYYRCTYT ERNCSATKTV QQQDQDGGSS IYSADAGEDQ  240
GAKYTVVYYG DHTCKASDNI SNNIIDHLPN LVDIDLRRGD TERVTLEIPE FEMELDVPAL  300
LEVFNNSQLN WEIVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165RKRRR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696610.0EU669661.1 Triticum aestivum WRKY31 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004980128.13e-94PREDICTED: probable WRKY transcription factor 26
TrEMBLN1R4390.0N1R439_AEGTA; Uncharacterized protein
STRINGSi027876m2e-92(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.21e-13WRKY DNA-binding protein 67